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  5. Sacu_v1.1_s0047.g013455

Sacu_v1.1_s0047.g013455


Description : not classified & original description: CDS=833-2278


Gene families : OG0000510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000510_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0047.g013455

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00182670 evm_27.TU.AmTr_v1... F-box protein At1g67340 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Adi_g011761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g011762 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g018998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02025 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g07878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08046 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g15991 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene30003.t1 Aspi01Gene30003 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene47030.t1 Aspi01Gene47030 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene67042.t1 Aspi01Gene67042 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0092.g043090 No alias not classified & original description: CDS=327-2291 0.04 OrthoFinder output from all 47 species
Cba_g16241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G014500.1 Ceric.17G014500 not classified & original description: pacid=50617361... 0.03 OrthoFinder output from all 47 species
Dcu_g07501 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g02435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04517 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g06870 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g30300.1 LOC_Os02g30300 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g31610.1 LOC_Os04g31610 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os11g29710.1 LOC_Os11g29710 F-box protein At1g67340 OS=Arabidopsis thaliana... and antiporters." [GOC:mtgCluster_640.02 OrthoFinder output from all 47 species
Lfl_g01626 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10217369g0010 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_219531g0010 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_61451g0010 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_6399g0010 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g02374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06789 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33138 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g11804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc05g015420.4.1 Solyc05g015420 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Spa_g31042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07511 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e008387_P001 Zm00001e008387 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e028443_P002 Zm00001e028443 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002893 Znf_MYND 410 450
No external refs found!