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  5. Sacu_v1.1_s0046.g013395

Sacu_v1.1_s0046.g013395


Description : not classified & original description: CDS=85-822


Gene families : OG0001843 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001843_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0046.g013395
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Adi_g010784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g015212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g023304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g041366 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g046355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010308 No alias not classified & original description: CDS=1-894 0.04 OrthoFinder output from all 47 species
Len_g11619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06588 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0007029 endoplasmic reticulum organization IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0018142 protein-DNA covalent cross-linking IEP HCCA
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA

No InterPro domains available for this sequence

No external refs found!