Sacu_v1.1_s0045.g013292


Description : not classified & original description: CDS=107-649


Gene families : OG0001843 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001843_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0045.g013292

Target Alias Description ECC score Gene Family Method Actions
Adi_g010784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g011091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g023304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g046355 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g113088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02864 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61567.t1 HRD, Aspi01Gene61567 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000991 No alias not classified & original description: CDS=384-923 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010308 No alias not classified & original description: CDS=1-894 0.04 OrthoFinder output from all 47 species
Cba_g05124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g00520 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g11619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19667 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004360 No alias not classified & original description: CDS=184-687 0.04 OrthoFinder output from all 47 species
Sam_g06353 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g06587 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g06588 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g10901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17439 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g39340 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g06801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01612 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10596 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!