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  5. Sacu_v1.1_s0045.g013290

Sacu_v1.1_s0045.g013290


Description : not classified & original description: CDS=211-1392


Gene families : OG0005317 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005317_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0045.g013290
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Aop_g70091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
CC GO:0045273 respiratory chain complex II IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007823 RRP8 109 306
No external refs found!