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  5. Sacu_v1.1_s0045.g013254

Sacu_v1.1_s0045.g013254


Description : not classified & original description: CDS=814-1218


Gene families : OG0000447 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000447_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0045.g013254

Target Alias Description ECC score Gene Family Method Actions
Lfl_g03145 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g48795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR007877 DUF707 17 115
No external refs found!