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  5. Sacu_v1.1_s0045.g013190

Sacu_v1.1_s0045.g013190


Description : Kinesin-5-type motor protein & original description: CDS=5196-8372


Gene families : OG0000122 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000122_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0045.g013190
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AT2G36200 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT3G10180 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020684.12 ATK4, KATD Kinesin-like protein KIN-14G OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Smo116032 POK1 Cytoskeleton.microtubular network.Kinesin... 0.01 OrthoFinder output from all 47 species
Tin_g15630 No alias Kinesin-7-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0007018 microtubule-based movement IEA Interproscan
MF GO:0008017 microtubule binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
CC GO:0042575 DNA polymerase complex IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
CC GO:0043625 delta DNA polymerase complex IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001752 Kinesin_motor_dom 17 353
IPR002885 Pentatricopeptide_repeat 308 328
IPR002885 Pentatricopeptide_repeat 409 431
IPR002885 Pentatricopeptide_repeat 437 462
IPR002885 Pentatricopeptide_repeat 336 355
IPR002885 Pentatricopeptide_repeat 135 162
IPR002885 Pentatricopeptide_repeat 839 886
IPR002885 Pentatricopeptide_repeat 535 583
IPR002885 Pentatricopeptide_repeat 738 784
IPR002885 Pentatricopeptide_repeat 233 279
IPR002885 Pentatricopeptide_repeat 637 683
No external refs found!