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  5. Sacu_v1.1_s0045.g013169

Sacu_v1.1_s0045.g013169


Description : not classified & original description: CDS=594-4430


Gene families : OG0003216 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003216_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0045.g013169

Target Alias Description ECC score Gene Family Method Actions
Dac_g15620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g24307 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g11298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19121 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24258 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g17157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0017069 snRNA binding IEP HCCA
MF GO:0017070 U6 snRNA binding IEP HCCA
MF GO:0030623 U5 snRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!