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  5. Sacu_v1.1_s0045.g013134

Sacu_v1.1_s0045.g013134


Description : substrate(PAL) adaptor of SCF E3 ubiquitin ligase *(KFB-PAL) & original description: CDS=1-1212


Gene families : OG0000998 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000998_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0045.g013134
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Aev_g10074 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aev_g41720 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.19G006500.1 Ceric.19G006500 substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dcu_g12336 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
GSVIVT01017545001 No alias Secondary metabolism.phenolics.regulation of key... 0.04 OrthoFinder output from all 47 species
Gb_34879 No alias proteolytic phenylalanine ammonia-lyase regulator (KFB-PAL) 0.04 OrthoFinder output from all 47 species
Gb_34880 No alias proteolytic phenylalanine ammonia-lyase regulator (KFB-PAL) 0.03 OrthoFinder output from all 47 species
MA_19365g0010 No alias proteolytic phenylalanine ammonia-lyase regulator (KFB-PAL) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003410 No alias not classified & original description: CDS=1-1110 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 188 221
IPR006652 Kelch_1 131 172
IPR001810 F-box_dom 14 50
No external refs found!