Sacu_v1.1_s0043.g012910


Description : histone demethylase *(PKDM8) & original description: CDS=45-3857


Gene families : OG0002434 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002434_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0043.g012910
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Aev_g18987 No alias histone demethylase *(PKDM8) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19823 No alias histone demethylase *(PKDM8) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20350 No alias histone demethylase *(PKDM8) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0016.g014270 No alias histone demethylase *(PKDM8) & original description: CDS=141-2051 0.05 OrthoFinder output from all 47 species
Dac_g12573 No alias histone demethylase *(PKDM8) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04152 No alias histone demethylase *(PKDM8) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024382001 No alias Protein modification.phosphorylation.TKL kinase... 0.03 OrthoFinder output from all 47 species
Gb_02799 No alias histone demethylase (PKDM8). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species
Gb_21111 No alias histone demethylase (PKDM8). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species
MA_10430071g0010 No alias histone demethylase (PKDM8). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species
Ppi_g41949 No alias histone demethylase *(PKDM8) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g076390.3.1 Solyc08g076390 histone demethylase (PKDM8). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species
Spa_g03829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR003347 JmjC_dom 249 372
IPR003349 JmjN 73 105
No external refs found!