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  5. Sacu_v1.1_s0042.g012694

Sacu_v1.1_s0042.g012694 (ATG8A, APG8A)


Aliases : ATG8A, APG8A

Description : autophagosome ubiquitin-fold protein *(ATG8) & original description: CDS=125-481


Gene families : OG0000801 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000801_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0042.g012694

Target Alias Description ECC score Gene Family Method Actions
Aev_g06303 ATG8A, APG8A autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Aop_g00128 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os07g32800.2 ATG8C, LOC_Os07g32800 ATG8 autophagosome ubiquitin-fold protein 0.03 OrthoFinder output from all 47 species
Nbi_g00307 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g08640 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Pir_g56569 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.04 OrthoFinder output from all 47 species
Spa_g02744 ATG8D autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Spa_g25476 ATG8D autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e010463_P001 ATG8C, Zm00001e010463 ATG8 autophagosome ubiquitin-fold protein 0.02 OrthoFinder output from all 47 species
Zm00001e041680_P001 ATG8C, Zm00001e041680 ATG8 autophagosome ubiquitin-fold protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004241 Atg8-like 57 159
No external refs found!