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  5. Sacu_v1.1_s0041.g012482

Sacu_v1.1_s0041.g012482


Description : arogenate dehydrogenase *(ADH) & original description: CDS=90-1340


Gene families : OG0002268 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002268_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0041.g012482
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Ceric.12G079800.1 Ceric.12G079800 arogenate dehydrogenase *(ADH) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000430.41 No alias Amino acid metabolism.biosynthesis.shikimate... 0.02 OrthoFinder output from all 47 species
Len_g27731 No alias arogenate dehydrogenase *(ADH) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0070403 NAD+ binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR046826 PDH_N 179 245
No external refs found!