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  5. Sacu_v1.1_s0040.g012443

Sacu_v1.1_s0040.g012443


Description : not classified & original description: CDS=19-948


Gene families : OG0001091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001091_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0040.g012443
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cba_g25694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G065800.1 Ceric.05G065800 not classified & original description: pacid=50578796... 0.04 OrthoFinder output from all 47 species
Ceric.33G015000.1 Ceric.33G015000 not classified & original description: pacid=50607719... 0.03 OrthoFinder output from all 47 species
Dde_g03262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04302 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g00945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06314 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g00749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 56 266
No external refs found!