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  5. Sacu_v1.1_s0040.g012276

Sacu_v1.1_s0040.g012276 (RUS1)


Aliases : RUS1

Description : not classified & original description: CDS=64-1971


Gene families : OG0002934 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002934_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0040.g012276

Target Alias Description ECC score Gene Family Method Actions
Aev_g18254 RUS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g59406 RUS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020479001 RUS1 Protein root UVB sensitive 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
LOC_Os04g43690.1 RUS2, WXR1,... Protein root UVB sensitive 2, chloroplastic... 0.02 OrthoFinder output from all 47 species
MA_106341g0010 RUS1 Protein root UVB sensitive 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g26281 RUS1 not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0004019 adenylosuccinate synthase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0031179 peptide modification IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006968 RUS_fam 224 457
IPR002885 Pentatricopeptide_repeat 254 277
IPR002885 Pentatricopeptide_repeat 355 380
IPR002885 Pentatricopeptide_repeat 152 174
IPR002885 Pentatricopeptide_repeat 75 123
IPR002885 Pentatricopeptide_repeat 178 224
IPR002885 Pentatricopeptide_repeat 279 327
IPR002885 Pentatricopeptide_repeat 63 101
No external refs found!