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  5. Ehy_g06550

Ehy_g06550 (NPSN12, ATNPSN12)


Aliases : NPSN12, ATNPSN12

Description : Qb-type NPSN-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0002530 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002530_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g06550

Target Alias Description ECC score Gene Family Method Actions
AT1G48240 NPSN12, ATNPSN12 novel plant snare 12 0.03 OrthoFinder output from all 47 species
Adi_g108233 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
LOC_Os07g44350.1 NPSN13,... NPSN group Qb-type SNARE protein 0.02 OrthoFinder output from all 47 species
Msp_g04606 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005484 SNAP receptor activity IEA Interproscan
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR005606 Sec20 101 175
No external refs found!