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  5. Sacu_v1.1_s0036.g011680

Sacu_v1.1_s0036.g011680


Description : not classified & original description: CDS=41-2725


Gene families : OG0000748 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000748_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0036.g011680
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Ala_g11531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g72849 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G016500.1 Ceric.20G016500 not classified & original description: pacid=50566368... 0.03 OrthoFinder output from all 47 species
Ceric.20G016700.1 Ceric.20G016700 not classified & original description: pacid=50567234... 0.04 OrthoFinder output from all 47 species
Ceric.20G016800.1 Ceric.20G016800 not classified & original description: pacid=50566388... 0.03 OrthoFinder output from all 47 species
Ceric.30G026600.1 Ceric.30G026600 not classified & original description: pacid=50608946... 0.06 OrthoFinder output from all 47 species
Dac_g40588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_28520 No alias Glycine-rich domain-containing protein 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g03397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g29810.1 No alias Glycine-rich domain-containing protein 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp3g10020.1 No alias Glycine-rich domain-containing protein 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g10030.1 No alias Glycine-rich domain-containing protein 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g16098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011450 No alias not classified & original description: CDS=134-3274 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011691 No alias not classified & original description: CDS=87-2417 0.03 OrthoFinder output from all 47 species
Sam_g34224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g099980.4.1 Solyc01g099980 Glycine-rich domain-containing protein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc02g091650.4.1 Solyc02g091650 Glycine-rich domain-containing protein 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR009836 GRDP-like 20 198
No external refs found!