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  5. Sacu_v1.1_s0036.g011547

Sacu_v1.1_s0036.g011547


Description : not classified & original description: CDS=796-1695


Gene families : OG0000658 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000658_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0036.g011547

Target Alias Description ECC score Gene Family Method Actions
Als_g11975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18219.t1 Aspi01Gene18219 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50737.t1 Aspi01Gene50737 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69602.t2 Aspi01Gene69602 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035279001 ATOXS3, OXS3 No description available 0.02 OrthoFinder output from all 47 species
Nbi_g10783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
BP GO:0042274 ribosomal small subunit biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!