Sacu_v1.1_s0035.g011503


Description : not classified & original description: CDS=195-1040


Gene families : OG0000394 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000394_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0035.g011503

Target Alias Description ECC score Gene Family Method Actions
Adi_g058242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16770 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g38781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g15202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_51201g0010 No alias Protein FLX-like 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g29327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00322 No alias component *(FLX) of FRI-C transcription effector complex... 0.03 OrthoFinder output from all 47 species
Pir_g02515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!