Sacu_v1.1_s0035.g011353

Description : EC_4.1 carbon-carbon lyase & original description: CDS=1-1377

Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0035.g011353

Target	Alias	Description	ECC score	Gene Family Method
Ala_g02589	SAMDC	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0001.g000015	No alias	EC_4.1 carbon-carbon lyase & original description: CDS=1-1215	0.04	OrthoFinder output from all 47 species
Len_g20881	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEA	Interproscan
BP	GO:0006576	biogenic amine metabolic process	None	Extended
BP	GO:0006595	polyamine metabolic process	None	Extended
BP	GO:0006596	polyamine biosynthetic process	None	Extended
BP	GO:0006597	spermine biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008215	spermine metabolic process	None	Extended
BP	GO:0008216	spermidine metabolic process	None	Extended
BP	GO:0008295	spermidine biosynthetic process	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009309	amine biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042401	biogenic amine biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	HCCA
BP	GO:0006534	cysteine metabolic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0009069	serine family amino acid metabolic process	IEP	HCCA
BP	GO:0009092	homoserine metabolic process	IEP	HCCA
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	HCCA
BP	GO:0010215	cellulose microfibril organization	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
BP	GO:0019346	transsulfuration	IEP	HCCA
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0030198	extracellular matrix organization	IEP	HCCA
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	IEP	HCCA
BP	GO:0043062	extracellular structure organization	IEP	HCCA
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	HCCA
BP	GO:0050667	homocysteine metabolic process	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001985	S-AdoMet_decarboxylase	18	338

External Links

No external refs found!

Sacu_v1.1_s0035.g011353

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation