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  5. Sacu_v1.1_s0031.g010551

Sacu_v1.1_s0031.g010551 (ATHB5, ATHB-5, HB5)


Aliases : ATHB5, ATHB-5, HB5

Description : HD-ZIP I/II-type transcription factor & original description: CDS=1-1500


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0031.g010551
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Adi_g104185 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene48667.t2 ATHB40, HB40,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g27646 ATHB3, HB-3, ATHB-3, HAT7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02564 ATHB16, HB16, ATHB-16 regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Len_g14437 ATHB40, HB40, HB-5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g09793 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g10250 No alias HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g24411 No alias HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g37807 No alias HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Smo18217 ATHB16, HB16, ATHB-16 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 256 310
No external refs found!