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  5. Sacu_v1.1_s0031.g010542

Sacu_v1.1_s0031.g010542


Description : not classified & original description: CDS=209-1717


Gene families : OG0006180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0031.g010542

Target Alias Description ECC score Gene Family Method Actions
Aop_g30518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_19843g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g40697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR028124 SMAP_dom 431 501
No external refs found!