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  5. Sacu_v1.1_s0028.g009873

Sacu_v1.1_s0028.g009873


Description : not classified & original description: CDS=1-1428


Gene families : OG0011759 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011759_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0028.g009873

Target Alias Description ECC score Gene Family Method Actions
Spa_g06297 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 86 114
IPR002885 Pentatricopeptide_repeat 349 396
IPR033443 PPR_long 226 342
No external refs found!