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  5. Sacu_v1.1_s0025.g009405

Sacu_v1.1_s0025.g009405 (SPL12)


Aliases : SPL12

Description : SBP-type transcription factor & original description: CDS=553-3771


Gene families : OG0001309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0025.g009405
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00106940 SPL1R2, ATSPL14,... RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
AT1G20980 SPL1R2, ATSPL14,... squamosa promoter binding protein-like 14 0.02 OrthoFinder output from all 47 species
Adi_g099813 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29191 SPL1R2, ATSPL14,... SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene51466.t2 SPL1R2, ATSPL14,... SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33366 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05078 SPL1 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_41517 No alias transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os01g18850.1 SPL1, LOC_Os01g18850 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Lfl_g10194 SPL1 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g13640.1 No alias transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Ore_g01911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29634 SPL1 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39394 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g068100.4.1 SPL1, Solyc01g068100 Squamosa promoter-binding-like protein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e003571_P002 Zm00001e003571 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 172 245
No external refs found!