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  5. Sacu_v1.1_s0025.g009289

Sacu_v1.1_s0025.g009289 (SMU2)


Aliases : SMU2

Description : component *(SMU2) of SMU splicing factor complex & original description: CDS=68-1975


Gene families : OG0004764 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004764_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0025.g009289
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Ore_g30538 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.03 OrthoFinder output from all 47 species
Pir_g11768 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.02 OrthoFinder output from all 47 species
Sam_g39144 No alias component *(SMU2) of SMU splicing factor complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
InterPro domains Description Start Stop
IPR012492 RED_C 512 618
IPR012916 RED_N 81 297
No external refs found!