1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0024.g009067

Sacu_v1.1_s0024.g009067 (SNP33, SNAP33,...)


Aliases : SNP33, SNAP33, ATSNAP33B, ATSNAP33

Description : Qbc-type SNAP25-group component of SNARE membrane fusion complex & original description: CDS=126-1202


Gene families : OG0002168 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002168_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0024.g009067

Target Alias Description ECC score Gene Family Method Actions
Adi_g010812 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aev_g02410 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Azfi_s0117.g046599 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Azfi_s0359.g066869 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
GSVIVT01007921001 SNP33, SNAP33,... Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
GSVIVT01012200001 SNAP30, ATSNAP30 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
LOC_Os02g24080.4 SNP33, SNAP33,... SNAP25 group Qbc-type SNARE protein 0.04 OrthoFinder output from all 47 species
Len_g18513 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Msp_g10288 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Pnu_g25762 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Sam_g03351 No alias Qbc-type SNAP25-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Sam_g38615 No alias Qbc-type SNAP25-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Solyc06g069570.3.1 SNP33, SNAP33,... SNAP25 group Qbc-type SNARE protein 0.03 OrthoFinder output from all 47 species
Zm00001e033374_P002 SNP33, SNAP33,... SNAP25 group Qbc-type SNARE protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005047 signal recognition particle binding IEP HCCA
CC GO:0005785 signal recognition particle receptor complex IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!