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  5. Sacu_v1.1_s0024.g009048

Sacu_v1.1_s0024.g009048 (ATHDA15, HDA15)


Aliases : ATHDA15, HDA15

Description : class-II histone deacetylase & original description: CDS=178-1890


Gene families : OG0001559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0024.g009048

Target Alias Description ECC score Gene Family Method Actions
Aev_g06072 ATHDA5, HDA05, HDA5 class-II histone deacetylase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g31554 ATHDA5, HDA05, HDA5 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g18820 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Cre03.g160000 ATHDA15, HDA15 Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder output from all 47 species
Dcu_g01843 ATHDA5, HDA05, HDA5 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19491 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os07g06980.1 ATHDA15, HDA15,... class-II histone deacetylase 0.02 OrthoFinder output from all 47 species
MA_10433146g0010 ATHDA5, HDA05, HDA5 class-II histone deacetylase 0.01 OrthoFinder output from all 47 species
Msp_g05231 ATHDA5, HDA05, HDA5 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35187 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10819 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
CC GO:1990316 Atg1/ULK1 kinase complex IEP HCCA
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 186 432
No external refs found!