Description : not classified & original description: CDS=1-2037
Gene families : OG0000102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000102_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g010482 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g59182 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g13768 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g02108 | ATCHR12 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g02115 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g13700 | No alias | chromatin remodeling factor *(ALC1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.06G004000.1 | Ceric.06G004000 | chromatin remodeling factor *(ALC1) & original... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020848.66 | No alias | Probable helicase CHR10 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Cre12.g508150 | CHR11 | Chromatin organisation.chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g34346 | No alias | chromatin remodeling factor *(ALC1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g27040.1 | CHR17, LOC_Os01g27040 | chromatin remodeling factor (Iswi) | 0.02 | OrthoFinder output from all 47 species | |
Len_g08675 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g06769 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
Mp8g17660.1 | ATCHR12 | chromatin remodeling factor (Snf2) | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g12189 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g23580 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0004.g002414 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g14615 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g29292 | No alias | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g10985 | ATCHR12 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | HCCA |
BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0004673 | protein histidine kinase activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
CC | GO:0016592 | mediator complex | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
MF | GO:0031267 | small GTPase binding | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
MF | GO:0051020 | GTPase binding | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
MF | GO:0140299 | small molecule sensor activity | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No external refs found! |