1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0021.g008478

Sacu_v1.1_s0021.g008478 (SS2, AtSS2)


Aliases : SS2, AtSS2

Description : EC_2.4 glycosyltransferase & original description: CDS=1-2037


Gene families : OG0001429 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001429_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0021.g008478
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Aob_g23997 SS2, AtSS2 EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0314.g064253 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: CDS=1-672 0.03 OrthoFinder output from all 47 species
LOC_Os02g51070.1 SS2, AtSS2,... starch synthase (SSII) 0.03 OrthoFinder output from all 47 species
Ppi_g31466 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Smo155312 SS2, AtSS2 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 201 430
IPR001296 Glyco_trans_1 491 632
No external refs found!