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Description : not classified & original description: CDS=1-1578
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00241920 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00016p00259690 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g46460,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00057p00137550 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g36980,... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G61170 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g019854 | LPA66 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g033460 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g034009 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g073485 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g088362 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g100866 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g101200 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g110647 | MEF21 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g117996 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g32888 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g46737 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g16441 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g20781 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g26450 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g38174 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g09002 | CRR2 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g12171 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g24214 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g29803 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g31582 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g31975 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g34282 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g36669 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene01906.t1 | Aspi01Gene01906 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene31801.t1 | Aspi01Gene31801 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene43919.t1 | OTP84, Aspi01Gene43919 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene61369.t1 | CRR22, Aspi01Gene61369 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene65088.t1 | Aspi01Gene65088 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0136.g050953 | No alias | not classified & original description: CDS=1-2220 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0474.g072983 | No alias | not classified & original description: CDS=1-2562 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0652.g081079 | No alias | not classified & original description: CDS=1-2169 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s1334.g101644 | No alias | not classified & original description: CDS=1-3543 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s1396.g102567 | No alias | not classified & original description: CDS=1-1371 | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g04634 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05522 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g06120 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g07300 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07421 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20476 | MEF22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20647 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20876 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34429 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g43653 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g45888 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G093000.1 | Ceric.05G093000 | not classified & original description: pacid=50577993... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.08G020400.1 | OTP84, Ceric.08G020400 | not classified & original description: pacid=50638334... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G007000.1 | Ceric.09G007000 | not classified & original description: pacid=50586983... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.11G042100.1 | EMB2758, Ceric.11G042100 | not classified & original description: pacid=50596851... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.1Z254100.1 | Ceric.1Z254100 | not classified & original description: pacid=50632850... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.21G062800.1 | Ceric.21G062800 | not classified & original description: pacid=50603272... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G072200.1 | Ceric.22G072200 | not classified & original description: pacid=50614353... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G067100.1 | CRR22, Ceric.27G067100 | not classified & original description: pacid=50605115... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.31G002400.1 | Ceric.31G002400 | not classified & original description: pacid=50574432... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.33G052800.1 | Ceric.33G052800 | not classified & original description: pacid=50607149... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001038.5 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021035.24 | No alias | Pentatricopeptide repeat-containing protein At1g63080,... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g03810 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g18287 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g18571 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g21447 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g21452 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g04440 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g05342 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g06677 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g15388 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g16795 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g23363 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g25743 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g40545 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g00984 | OSB3 | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04950 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g19509 | OTP82 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g19510 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01025574001 | No alias | Pentatricopeptide repeat-containing protein At2g37320... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_21439 | No alias | RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g55840.1 | LOC_Os03g55840 | Pentatricopeptide repeat-containing protein DWY1,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g14450.1 | LOC_Os04g14450 | Pentatricopeptide repeat-containing protein At4g14820... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g08837 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17565 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18587 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18932 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18962 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07771 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07796 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g15171 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g02471 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g03763 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g31656 | OTP86 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g34210 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g36039 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g41129 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g04976 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g44509 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g19382 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g23513 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g35928 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g07049 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g15855 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g47021 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g57706 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g15703 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g20888 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g22601 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23075 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23584 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g26686 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g30572 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30607 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06968 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07615 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g13334 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g16308 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g39360 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g43237 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0012.g005530 | CRR22 | not classified & original description: CDS=1-2547 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0027.g009681 | No alias | not classified & original description: CDS=1-2907 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g04999 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g06265 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11962 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g21944 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g28003 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g33433 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g46501 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g50768 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g100340.4.1 | Solyc01g100340 | Pentatricopeptide repeat-containing protein At1g09190... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g053850.4.1 | Solyc06g053850 | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g09360 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g33790 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g06074 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06117 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23009 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26612 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g28558 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e008183_P001 | Zm00001e008183 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032581_P001 | Zm00001e032581 | RNA editing factor (BLX) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
| BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016763 | pentosyltransferase activity | IEP | HCCA |
| BP | GO:0023051 | regulation of signaling | IEP | HCCA |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0032784 | regulation of DNA-templated transcription elongation | IEP | HCCA |
| BP | GO:0032786 | positive regulation of DNA-templated transcription, elongation | IEP | HCCA |
| BP | GO:0032968 | positive regulation of transcription elongation by RNA polymerase II | IEP | HCCA |
| BP | GO:0034243 | regulation of transcription elongation by RNA polymerase II | IEP | HCCA |
| BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0045944 | positive regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
| BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
| BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | HCCA |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | HCCA |
| No external refs found! |