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  5. Sacu_v1.1_s0021.g008412

Sacu_v1.1_s0021.g008412


Description : not classified & original description: CDS=59-697


Gene families : OG0007747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007747_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0021.g008412
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AT5G02740 No alias Ribosomal protein S24e family protein 0.04 OrthoFinder output from all 47 species
Ceric.26G067300.1 Ceric.26G067300 not classified & original description: pacid=50598980... 0.03 OrthoFinder output from all 47 species
Nbi_g03397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g05893 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g38041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!