1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0021.g008303

Sacu_v1.1_s0021.g008303


Description : not classified & original description: CDS=17-973


Gene families : OG0001064 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001064_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0021.g008303
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s01349p00000840 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
Adi_g114483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g03897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g09503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g081050.1.1 Solyc10g081050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g02558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019080 YqaJ_viral_recombinase 88 229
No external refs found!