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  5. Sacu_v1.1_s0020.g008248

Sacu_v1.1_s0020.g008248


Description : component *(TFB1) of TFIIh basal transcription factor complex & original description: CDS=248-2077


Gene families : OG0004762 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004762_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0020.g008248

Target Alias Description ECC score Gene Family Method Actions
Aob_g02167 No alias component *(TFB1) of TFIIh basal transcription factor... 0.02 OrthoFinder output from all 47 species
Cre10.g466550 No alias RNA biosynthesis.transcriptional activation.BSD... 0.01 OrthoFinder output from all 47 species
Ore_g33117 No alias component *(TFB1) of TFIIh basal transcription factor... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0031179 peptide modification IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR013876 TFIIH_BTF_p62_N 21 98
IPR005607 BSD_dom 210 252
No external refs found!