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Aliases : ATRZ-1A
Description : RNA chaperone *(RZ1) & original description: CDS=129-794
Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G04280 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein with... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g021389 | GR-RBP3 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g06710 | No alias | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g05819 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene27876.t1 | Aspi01Gene27876 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0051.g031234 | No alias | not classified & original description: CDS=60-764 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0468.g072856 | GR-RBP4, GRP4 | not classified & original description: CDS=1-582 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g01674 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g04821 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g44420 | No alias | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g67441 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g12785 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g21776 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g18518 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g21135 | CCR2, ATGRP7,... | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g23738 | No alias | RNA chaperone *(RZ1) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g05645 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g20372 | GR-RBP3 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g26099 | CCR2, ATGRP7,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g26805 | No alias | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g17921 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g30959 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g09617 | No alias | RNA editing factor *(ORRM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g27936 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g16011 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e028502_P003 | Zm00001e028502 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
| MF | GO:0004860 | protein kinase inhibitor activity | IEP | HCCA |
| MF | GO:0004861 | cyclin-dependent protein serine/threonine kinase inhibitor activity | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| MF | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| MF | GO:0019207 | kinase regulator activity | IEP | HCCA |
| MF | GO:0019210 | kinase inhibitor activity | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| MF | GO:0019887 | protein kinase regulator activity | IEP | HCCA |
| MF | GO:0030291 | protein serine/threonine kinase inhibitor activity | IEP | HCCA |
| BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
| No external refs found! |