Sacu_v1.1_s0020.g008019


Description : not classified & original description: CDS=1-1290


Gene families : OG0000390 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0020.g008019

Target Alias Description ECC score Gene Family Method Actions
AT5G09850 No alias Transcription elongation factor (TFIIS) family protein 0.03 OrthoFinder output from all 47 species
Adi_g008655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021758 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085252 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g25669 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g29178 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Cba_g37242 No alias component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Ceric.23G045200.1 Ceric.23G045200 not classified & original description: pacid=50610105... 0.02 OrthoFinder output from all 47 species
Dac_g22233 No alias component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Dcu_g19305 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Dde_g23477 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Ehy_g15121 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
GSVIVT01019798001 No alias No description available 0.01 OrthoFinder output from all 47 species
Gb_30192 No alias component MED26 of MEDIATOR transcription co-activator complex 0.02 OrthoFinder output from all 47 species
Len_g23062 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g080930.2.1 Solyc10g080930 component MED26 of MEDIATOR transcription co-activator complex 0.03 OrthoFinder output from all 47 species
Solyc11g005450.3.1 Solyc11g005450 Probable mediator of RNA polymerase II transcription... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA

No InterPro domains available for this sequence

No external refs found!