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  5. Sacu_v1.1_s0019.g007907

Sacu_v1.1_s0019.g007907 (YKT61, ATGP1, ATYKT61)


Aliases : YKT61, ATGP1, ATYKT61

Description : R-type YKT6-group component of SNARE longin membrane fusion complex & original description: CDS=189-794


Gene families : OG0002670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0019.g007907

Target Alias Description ECC score Gene Family Method Actions
Aop_g41625 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
LOC_Os01g64650.2 YKT61, ATGP1,... YKT6-type R-type SNARE longin protein 0.03 OrthoFinder output from all 47 species
Ore_g29192 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Smo166326 YKT61, ATGP1, ATYKT61 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Zm00001e028669_P001 YKT61, ATGP1,... YKT6-type R-type SNARE longin protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 48 114
IPR042855 V_SNARE_CC 139 196
No external refs found!