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  5. Sacu_v1.1_s0017.g007190

Sacu_v1.1_s0017.g007190


Description : component *(MED17) of head module of MEDIATOR transcription co-activator complex & original description: CDS=69-2126


Gene families : OG0007634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007634_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0017.g007190
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Adi_g059039 No alias component *(MED17) of head module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Als_g28075 No alias component *(MED17) of head module of MEDIATOR... 0.06 OrthoFinder output from all 47 species
Ehy_g03912 No alias component *(MED17) of head module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Mp5g24300.1 No alias component MED17 of head module of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Nbi_g12220 No alias component *(MED17) of head module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Ppi_g03167 No alias component *(MED17) of head module of MEDIATOR... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003689 DNA clamp loader activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
CC GO:0005663 DNA replication factor C complex IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
CC GO:0009360 DNA polymerase III complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0042575 DNA polymerase complex IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!