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  5. Sacu_v1.1_s0017.g007172

Sacu_v1.1_s0017.g007172


Description : lipopolysaccharide-binding protein *(LBR) involved in bacterial elicitor response & original description: CDS=235-1734


Gene families : OG0005816 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005816_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0017.g007172
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene51907.t1 Aspi01Gene51907 lipopolysaccharide-binding protein *(LBR) involved in... 0.03 OrthoFinder output from all 47 species
LOC_Os09g30474.1 LOC_Os09g30474 Putative BPI/LBP family protein At1g04970 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g04225 No alias lipopolysaccharide-binding protein *(LBR) involved in... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR017942 Lipid-bd_serum_glycop_N 52 222
IPR001124 Lipid-bd_serum_glycop_C 263 493
No external refs found!