Description : RNA helicase *(Brr2) & original description: CDS=159-5693
Gene families : OG0001175 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001175_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sacu_v1.1_s0017.g007145 | |
Cluster | HCCA: Cluster_7 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G61140 | No alias | U5 small nuclear ribonucleoprotein helicase | 0.03 | OrthoFinder output from all 47 species | |
Adi_g085426 | No alias | RNA helicase *(Brr2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene33379.t1 | Aspi01Gene33379 | RNA helicase *(Brr2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0003.g007779 | emb1507 | RNA helicase *(Brr2) & original description: CDS=215-6733 | 0.03 | OrthoFinder output from all 47 species | |
Ceric.1Z134800.1 | Ceric.1Z134800 | not classified & original description: pacid=50597112... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.1Z263400.1 | Ceric.1Z263400 | RNA helicase *(Brr2) & original description:... | 0.08 | OrthoFinder output from all 47 species | |
Cre17.g744147 | emb1507 | RNA processing.RNA splicing.spliceosome... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g11470.1 | LOC_Os03g11470 | DExH-box ATP-dependent RNA helicase DExH14... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g09106 | No alias | RNA helicase *(Brr2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10429486g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH14... | 0.07 | OrthoFinder output from all 47 species | |
MA_10434882g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH14... | 0.04 | OrthoFinder output from all 47 species | |
MA_10434991g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH14... | 0.03 | OrthoFinder output from all 47 species | |
MA_8113344g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH14... | 0.03 | OrthoFinder output from all 47 species | |
MA_81219g0020 | emb1507 | DExH-box ATP-dependent RNA helicase DExH12... | 0.03 | OrthoFinder output from all 47 species | |
MA_81219g0030 | emb1507 | DExH-box ATP-dependent RNA helicase DExH12... | 0.03 | OrthoFinder output from all 47 species | |
MA_930633g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH14... | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g069480.3.1 | Solyc06g069480 | DExH-box ATP-dependent RNA helicase DExH14... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g52342 | emb1507 | RNA helicase *(Brr2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g16674 | No alias | RNA helicase *(Brr2) & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000105 | histidine biosynthetic process | IEP | HCCA |
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
MF | GO:0005509 | calcium ion binding | IEP | HCCA |
CC | GO:0005875 | microtubule associated complex | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006547 | histidine metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008569 | minus-end-directed microtubule motor activity | IEP | HCCA |
BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
CC | GO:0030286 | dynein complex | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
No external refs found! |