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  5. Sacu_v1.1_s0016.g006927

Sacu_v1.1_s0016.g006927 (ATZIP4)


Aliases : ATZIP4

Description : meiotic crossover scaffold protein *(SPO22/ZIP4) & original description: CDS=1-2931


Gene families : OG0004175 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004175_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0016.g006927
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0167.g054463 ATZIP4 meiotic crossover scaffold protein *(SPO22/ZIP4) &... 0.04 OrthoFinder output from all 47 species
Ceric.24G056000.1 ATZIP4, Ceric.24G056000 meiotic crossover scaffold protein *(SPO22/ZIP4) &... 0.02 OrthoFinder output from all 47 species
Gb_10795 ATZIP4 meiotic crossover accessory protein (SPO22/ZIP4) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0051321 meiotic cell cycle IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005785 signal recognition particle receptor complex IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR013940 Spo22/ZIP4/TEX11 201 503
No external refs found!