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  5. Sacu_v1.1_s0015.g006458

Sacu_v1.1_s0015.g006458 (SBP1)


Aliases : SBP1

Description : not classified & original description: CDS=717-1820


Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0015.g006458

Target Alias Description ECC score Gene Family Method Actions
Adi_g054986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g107101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os11g34020.1 RING, LOC_Os11g34020 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g17171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005184_P001 Zm00001e005184 BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e024199_P001 Zm00001e024199 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035434 copper ion transmembrane transport IEP HCCA
MF GO:0043743 LPPG:FO 2-phospho-L-lactate transferase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!