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  5. Sacu_v1.1_s0015.g006439

Sacu_v1.1_s0015.g006439


Description : not classified & original description: CDS=315-2762


Gene families : OG0004721 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004721_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0015.g006439

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00242110 evm_27.TU.AmTr_v1... ATP-dependent DNA helicase At3g02060, chloroplastic... 0.03 OrthoFinder output from all 47 species
Aev_g07951 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g17279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22379 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g18567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G022800.1 Ceric.13G022800 not classified & original description: pacid=50636376... 0.05 OrthoFinder output from all 47 species
Dcu_g04126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08581 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os11g32880.1 LOC_Os11g32880 ATP-dependent DNA helicase At3g02060, chloroplastic... 0.02 OrthoFinder output from all 47 species
Len_g28141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g07230.1 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.02 OrthoFinder output from all 47 species
Sam_g42734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo77276 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.03 OrthoFinder output from all 47 species
Zm00001e011170_P004 Zm00001e011170 ATP-dependent DNA helicase At3g02060, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004019 adenylosuccinate synthase activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004347 glucose-6-phosphate isomerase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 468 568
IPR003711 CarD-like/TRCF_RID 219 314
No external refs found!