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  5. Sacu_v1.1_s0014.g006225

Sacu_v1.1_s0014.g006225


Description : regulatory protein *(PATROL1) involved in cellulose synthase trafficking & original description: CDS=229-3627


Gene families : OG0000883 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000883_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0014.g006225
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Aop_g02611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26995.t2 Aspi01Gene26995 regulatory protein *(PATROL1) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Ceric.38G054500.1 Ceric.38G054500 regulatory protein *(PATROL1) involved in cellulose... 0.04 OrthoFinder output from all 47 species
MA_10425785g0010 No alias Protein unc-13 homolog OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_68516g0010 No alias Protein unc-13 homolog OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp4g07000.1 No alias regulatory protein (PATROL1) of CSC trafficking 0.02 OrthoFinder output from all 47 species
Nbi_g03194 No alias regulatory protein *(PATROL1) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Pir_g20521 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo92955 No alias Protein unc-13 homolog OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc03g005630.3.1 Solyc03g005630 Protein unc-13 homolog OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc09g090480.2.1 Solyc09g090480 Protein unc-13 homolog OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
CC GO:0030008 TRAPP complex IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!