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Description : not classified & original description: CDS=777-1349
Gene families : OG0001387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001387_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0014.g006077 | |
| Cluster | HCCA: Cluster_32 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00011p00263350 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00025p00237880 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AT5G13720 | No alias | Uncharacterised protein family (UPF0114) | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g002396 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g026529 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g046850 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g01211 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g12087 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g04037 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g52268 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g00515 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0046.g030133 | No alias | not classified & original description: CDS=348-1217 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g03052 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.08G030500.1 | Ceric.08G030500 | not classified & original description: pacid=50637655... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g00963 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g46330.1 | LOC_Os07g46330 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g12632 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10426721g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_184655g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g06204 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g12373 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g19812 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e010892_P001 | Zm00001e010892 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006605 | protein targeting | IEP | HCCA |
| BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008134 | transcription factor binding | IEP | HCCA |
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| BP | GO:0010206 | photosystem II repair | IEP | HCCA |
| BP | GO:0010207 | photosystem II assembly | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| MF | GO:0017025 | TBP-class protein binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0030091 | protein repair | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
| BP | GO:0051668 | localization within membrane | IEP | HCCA |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005134 | UPF0114 | 34 | 154 |
| No external refs found! |