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  5. Sacu_v1.1_s0013.g005965

Sacu_v1.1_s0013.g005965


Description : E4 polyubiquitination factor *(UAP) & original description: CDS=34-1572


Gene families : OG0001079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0013.g005965
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Adi_g089023 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27592.t1 Aspi01Gene27592 E4 polyubiquitination factor *(UAP) & original description: none 0.04 OrthoFinder output from all 47 species
MA_944383g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g14465 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
InterPro domains Description Start Stop
IPR010820 DUF1421 465 508
No external refs found!