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  5. Sacu_v1.1_s0013.g005878

Sacu_v1.1_s0013.g005878


Description : not classified & original description: CDS=1-1302


Gene families : OG0003731 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003731_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0013.g005878
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Als_g01760 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36086 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene09725.t1 Aspi01Gene09725 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene48015.t1 Aspi01Gene48015 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene65464.t1 Aspi01Gene65464 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Mp7g02760.1 No alias F-box/kelch-repeat protein At1g55270 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp7g04930.1 No alias F-box/kelch-repeat protein At1g67480 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g38725 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g19968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!