Sacu_v1.1_s0013.g005842


Description : ribonuclease *(RNC1) & original description: CDS=1-1689


Gene families : OG0004387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004387_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0013.g005842

Target Alias Description ECC score Gene Family Method Actions
Aev_g36445 No alias ribonuclease *(RNC1) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g12300 No alias ribonuclease *(RNC1) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08305 No alias ribonuclease *(RNC1) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g08197 No alias ribonuclease *(RNC1) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12498 No alias ribonuclease *(RNC1) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30224 No alias ribonuclease *(RNC1) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01000148001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
Nbi_g17999 No alias ribonuclease *(RNC1) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18587 No alias ribonuclease *(RNC1) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e019511_P001 Zm00001e019511 ribonuclease (RNC1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP HCCA
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!