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  5. Sacu_v1.1_s0013.g005714

Sacu_v1.1_s0013.g005714 (ATDUF3, DUF3, HEMD,...)


Aliases : ATDUF3, DUF3, HEMD, UROS, ATUROS

Description : pre-60S ribosomal subunit assembly factor *(NSA1) & original description: CDS=1903-2958


Gene families : OG0007099 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0013.g005714

Target Alias Description ECC score Gene Family Method Actions
Ore_g26366 ATDUF3, DUF3,... uroporphyrinogen III synthase *(UROS) & original... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004852 uroporphyrinogen-III synthase activity IEA Interproscan
BP GO:0033014 tetrapyrrole biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0045048 protein insertion into ER membrane IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR003754 4pyrrol_synth_uPrphyn_synth 121 335
No external refs found!