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  5. Sacu_v1.1_s0012.g005643

Sacu_v1.1_s0012.g005643 (ZOU, RGE1)


Aliases : ZOU, RGE1

Description : bHLH-type transcription factor & original description: CDS=1-1506


Gene families : OG0000321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000321_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0012.g005643

Target Alias Description ECC score Gene Family Method Actions
Aev_g29214 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g34094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35688 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49839 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21797 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g02113 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02119 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02137 No alias bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Als_g05018 No alias bHLH-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Als_g16925 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11381 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68589 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g71396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene17268.t1 Aspi01Gene17268 bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene20827.t1 Aspi01Gene20827 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene56005.t1 NAI1, Aspi01Gene56005 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62024.t1 Aspi01Gene62024 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008231 No alias not classified & original description: CDS=1-1500 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009653 No alias bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g02950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05194 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06996 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g12369 NAI1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15968 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G032900.1 Ceric.07G032900 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.09G089000.1 Ceric.09G089000 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z015800.1 ZOU, RGE1, Ceric.1Z015800 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.29G028600.1 Ceric.29G028600 not classified & original description: pacid=50624922... 0.06 OrthoFinder output from all 47 species
Ceric.31G055400.1 Ceric.31G055400 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g11590 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15004 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g15044 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g18956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20358 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g35354 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40604 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g23361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_22275 BIM1 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Len_g09299 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g10560 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g38356 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10488 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g16061 ZOU, RGE1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_92168g0010 ZOU, RGE1 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Msp_g48319 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g11846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40583 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g05748 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06839 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59151 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000044 No alias not classified & original description: CDS=74-412 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008993 No alias bHLH-type transcription factor & original description: CDS=1-1788 0.04 OrthoFinder output from all 47 species
Sam_g13612 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19023 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47816 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44143 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 251 301
No external refs found!