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  5. Sacu_v1.1_s0012.g005638

Sacu_v1.1_s0012.g005638 (FIM1, ATFIM1)


Aliases : FIM1, ATFIM1

Description : fimbrin actin-crosslinking factor & original description: CDS=394-2367


Gene families : OG0001639 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001639_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0012.g005638

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00193060 FIM5, FIM2,... Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
Aev_g01348 FIM5, FIM2 fimbrin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000881.32 No alias Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
Ppi_g01242 FIM5, FIM2 fimbrin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15293 FIM5, FIM2 fimbrin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22697 FIM1, ATFIM1 fimbrin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001715 CH_dom 545 647
IPR001715 CH_dom 123 237
IPR001715 CH_dom 391 489
IPR001715 CH_dom 268 368
No external refs found!