Sacu_v1.1_s0012.g005457 (VAN3, SFC, AGD3)

Aliases : VAN3, SFC, AGD3

Description : class I ARF-GAP ARF-GTPase-activating protein & original description: CDS=354-2789

Gene families : OG0002309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002309_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0012.g005457

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00121120	AGD2,...	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.03	OrthoFinder output from all 47 species
AT1G10870	AGD4	ARF-GAP domain 4	0.03	OrthoFinder output from all 47 species
Aev_g02576	VAN3, SFC, AGD3	class I ARF-GAP ARF-GTPase-activating protein & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene70534.t1	VAN3, SFC, AGD3,...	class I ARF-GAP ARF-GTPase-activating protein & original...	0.03	OrthoFinder output from all 47 species
Cre03.g154150	AGD4	ADP-ribosylation factor GTPase-activating protein AGD1...	0.01	OrthoFinder output from all 47 species
Ehy_g27446	VAN3, SFC, AGD3	class I ARF-GAP ARF-GTPase-activating protein & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01001079001	VAN3, SFC, AGD3	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.03	OrthoFinder output from all 47 species
Lfl_g11485	VAN3, SFC, AGD3	class I ARF-GAP ARF-GTPase-activating protein & original...	0.03	OrthoFinder output from all 47 species
Solyc04g008660.4.1	AGD2, Solyc04g008660	class I ARF-GAP ARF-GTPase-activating protein	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005096	GTPase activator activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0008047	enzyme activator activity	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140677	molecular function activator activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004402	histone acetyltransferase activity	IEP	HCCA
MF	GO:0004478	methionine adenosyltransferase activity	IEP	HCCA
BP	GO:0006473	protein acetylation	IEP	HCCA
BP	GO:0006475	internal protein amino acid acetylation	IEP	HCCA
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	HCCA
MF	GO:0008080	N-acetyltransferase activity	IEP	HCCA
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016573	histone acetylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	HCCA
BP	GO:0018394	peptidyl-lysine acetylation	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
BP	GO:0030832	regulation of actin filament length	IEP	HCCA
BP	GO:0030833	regulation of actin filament polymerization	IEP	HCCA
MF	GO:0031267	small GTPase binding	IEP	HCCA
BP	GO:0032271	regulation of protein polymerization	IEP	HCCA
BP	GO:0032535	regulation of cellular component size	IEP	HCCA
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	HCCA
BP	GO:0032970	regulation of actin filament-based process	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043254	regulation of protein-containing complex assembly	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0044087	regulation of cellular component biogenesis	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
MF	GO:0051020	GTPase binding	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051493	regulation of cytoskeleton organization	IEP	HCCA
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	HCCA
BP	GO:0065008	regulation of biological quality	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0090066	regulation of anatomical structure size	IEP	HCCA
BP	GO:0110053	regulation of actin filament organization	IEP	HCCA
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001164	ArfGAP_dom	507	644
IPR001849	PH_domain	294	424
IPR002110	Ankyrin_rpt	710	779

External Links

No external refs found!

Sacu_v1.1_s0012.g005457 (VAN3, SFC, AGD3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation