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  5. Sacu_v1.1_s0011.g005361

Sacu_v1.1_s0011.g005361


Description : not classified & original description: CDS=108-1535


Gene families : OG0001760 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001760_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005361

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00054p00038860 evm_27.TU.AmTr_v1... Dirigent protein 17 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g019153 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05447 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g28276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!